"By Group" returns the sesults of the search grouped by signal.
Signals are grouped together.
Example of "By Group" results:
Factor or Site Name Loc.(Str.) Signal Sequence SITE # ------------------------------------------------------------------------
CTCF fact 362 (-) CCCTC S01948 ER fact 110 (-) GGTCA S01415 bA-globin.3 site 255 (-) CCAAT S00705 ovotransferrin_ site 269 (-) GGAAGGGAAG S01072 U2snRNA.2 site 47 (-) GTGCC S01031 U2snRNA.2 site 180 (-) GTGCC S01031 ADR-1 fact 122 (+) GGAGA S02098 GAL4 fact 276 (+) TCCTC S00686 GAL4 fact 427 (+) TCCTC S00686 GAL4 fact 436 (+) TCCTC S00686 AL4 fact 70 (-) TCCTC S00686 GAL4 fact 16 (-) TTATC S00687 GCN4 fact 407 (+) AAGTCA S00808 GCN4 fact 81 (+) TGATTC S00809 SBF fact 49 (+) CACGAAAA S02037 HIS4_US site 408 (-) TGACT S01125 HO_site site 49 (+) CACGAAAA S01105 URS2 site 49 (+) CACGAAAA S00103
"By Order" returns the results in the order the signals occur in the input sequence.
Example of "By Order" results:
Factor or Site Name Loc.(Str.) Signal Sequence SITE # -----------------------------------------------------------------------GAL4 fact 16 (-) TTATC S00687 U2snRNA.2 site 47 (-) GTGCC S01031 SBF fact 49 (+) CACGAAAA S02037 HO_site site 49 (+) CACGAAAA S01105 URS2 site 49 (+) CACGAAAA S00103 GAL4 fact 70 (-) TCCTC S00686 GCN4 fact 81 (+) TGATTC S00809 ER fact 110 (-) GGTCA S01415 ADR-1 fact 122 (+) GGAGA S02098 U2snRNA.2 site 180 (-) GTGCC S01031 bA-globin.3 site 255 (-) CCAAT S00705 ovotransferrin_ site 269 (-) GGAAGGGAAG S01072 GAL4 fact 276 (+) TCCTC S00686 CTCF fact 362 (-) CCCTC S01948 GCN4 fact 407 (+) AAGTCA S00808 HIS4_US site 408 (-) TGACT S01125 GAL4 fact 427 (+) TCCTC S00686 GAL4 fact 436 (+) TCCTC S00686
Mapped returns the results mapped below your input sequence. The signals reported begin in your sequences directly above the (+) or (-) symbols (for plus or minus strand). The first bp of a signal begins directly above the + in (+) strand signals.
Example of "Mapped" results:
(+) = Current Strand<br>
(-) = Opposite Strand
1 AGATCTTCCAGGCTGGATAAATAAACAAATCAGATAGCAAACTAATGGCA (-)GAL4 S00687 (-)U2snRNA.2 S01031 (+)SBF S02037 (+)HO_site S01105 (+)URS2 S00103 51 CGAAAAACATATTTTCACGGAGGAAAAAAATGATTCTGGTTATACGAGTG (-)GAL4 S00686 (+)GCN4 S00809 101 TATGGAATTTGACCTCGCCTCGGAGAAACACTACACAAAAGCTGTCTTTA (-)ER S01415 (+)ADR-1 S02098 151 ATAGACGCCTGTGGTTTAAGAGCGGCAGGGGCACTGTCCTTCATGCGTTC (-)U2snRNA.2 S01031 201 ACAAAAACAGAGCCGTAATTGTGGCTGCTGCTGTGGGCAGGATTTATTTC 251 TTCAATTGGCTAAATCGTCTTCCCTTCCTCGAAGGTGATATCTGTGTTTT (-)bA-globin.3 S00705 (-)ovotransferrin_ S01072 (+)GAL4 S00686 301 CAAAATTCACAGCTGCCGGCCGGGGGCTGGCAAACCGACCCCAACCTCTA 351 CACAAAAATAAGAGGGGATACAAAGCCGGGGAAATAAAGTTGTTGTAAAT (-)CTCF S01948 401 AATTCTAAGTCACCACCTCCCCCGAATCCTCTGTATCCTCGCCGGGCGTG (+)GCN4 S00808 (-)HIS4_US S01125 (+)GAL4 S00686 (+)GAL4 S00686Return to Signal Scan Analysis